rs30617053 SNP Detail

Summary

• ID
  rs30617053
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:129360336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATGTCCAT GGAATAGCAG
  GTAGATGAAG GCCTACTGCC AGTCAAGCAT GGAAGTCTCC TTGGGAAAGC CCTTAGTGGT
  TCATCACTGT ACCGCAGCCC TTTGGGGGAG AACCATTTTC GCTTGTTATC TAATCCTTTG
  CTTCAAAACC TCCCGTTCCA GAAGATATTT TAACTTCATG AATGTTTTAG ATCTTACTCG
  R
  CCCTGGCAGG GTCATTACGA CTGCTGGGTC CTTGTTCGGT CAGGGTGGCC GCTCCTTAGC
  CTTGCTATCT CTCCCAACTT TGGGGTTGTC CCCCTGCCCT TTTGTTTGTG TTTTGAAAGA
  GTTAGGCTTG TCTTGACGTG TAGCTTCTGC TAGCCTGGGA CTTTGGTCCT CCTGTGTCTG
  ATTCCTGAGT GTGCTCTCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss46965519	NES10878298	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs30617053					SNP	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46965519	NES10878298	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129360336 () rs orientation: forward

Symbol	Name	Function Class
Elovl6	ELOVL fatty acid elongase 6	Intron
Gm66250	predicted gene, 66250	within coordinates
Rr585032	regulatory region 585032	1464 bp distal
Rr585033	regulatory region 585033	415 bp distal