rs30615322 SNP Detail

Summary

• ID
  rs30615322
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:129424498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACAGAGTG TTTGCCTATA
  TGCTTTGAAT GTTAACTCCT AGTCTTATGC AATTAGTAAG TCCTACCATT ATTATTTGCT
  AAGAAAGGTT TATTCATTAG AATTACTTTT AATTAAGTTT TCTTATCCGT AAATCCTACC
  TTCTCTGCCT TTGTATGTTC TAAGAATTAT GGAGTCCTTT ATGAATACCA CAAAGAAAGG
  Y
  TTACTCTCAC ACACACACAC ACACACACAC ACACACACCT TTCTGGACTT TTTTATCTTC
  CCCCAACTGA AACTGAACTC ACTCCCCACT GACTCCTCAT CACTAAACTC TTAATGAGGG
  TAATAAGGGC TCTCCGTTCC AGTGGAAACA GTGAACTTGT TTCCATGGAT TTAAAGGACT
  TCACTCTACC AGTGAGAGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	PWD/PhJ	SM/J	WSB/EiJ
ss45564590	mCV22329850	ABI	CRAMUS_MOUSE	f	SNP		C	C			T		T
ss46966253	NES10874994	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C		T	T	C	T		T		T
ss135887191	ENSMUSSNP5627738	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C					T
ss320962648	CHEV_3_129333767	CHEVERUD	SCREENING_POP	f	SNP											C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	PWD/PhJ	SM/J	WSB/EiJ
rs30615322					SNP	C	C	C	C	C	T	T	T	C	T	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46966253	NES10874994	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129424498 () rs orientation: forward

Symbol	Name	Function Class
Elovl6	ELOVL fatty acid elongase 6	Intron
Rr585052	regulatory region 585052	258 bp proximal