rs30615041 SNP Detail

Summary

• ID
  rs30615041
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:129357324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATACCTGGC TATGCCCTAG
  TAATGAGCCG GTGGTGAGTC CTTCATGGAA GTTTTTCTTT GGCAAAAATG TGTCCCTGTC
  TTTAATAAAG CAGAGCATTT GAAGAAAATT GTAGCTTGGT CAGACGCTGG CAAAAAAAAA
  TAAGTTTCAG GTGTTGCTTA GTTACTGTGT TGTGTGTGAT CATTCGAAAC AGAGCCTGTT
  W
  TGTTACAGGT TGTGACTATG GTAGCGAGCC TCTGTAGCCA TTGTGCTAAT GGGTAAAATG
  TTATGAGAAG ATGAACTAGT CCTTGATAGA CAGTAGGATG TGGATGTATG ACATGATTGA
  CTTTTGCAAA TGGCATACCT GCTAAGTGCT CTTAACTGAA TCTGAGTCCA AGAAAATGAG
  TAGTTTTTTA ATTGATACAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46965495	NES10878453	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	A	A	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30615041					SNP	A	A	A	A	A	T	A	A	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46965495	NES10878453	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129357324 () rs orientation: forward

Symbol	Name	Function Class
Elovl6	ELOVL fatty acid elongase 6	Intron
Gm66250	predicted gene, 66250	289 bp downstream
Rr585032	regulatory region 585032	1235 bp proximal
Rr585033	regulatory region 585033	1769 bp proximal