rs30614964 SNP Detail

Summary

• ID
  rs30614964
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7711464 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTTAATCTT CTAGAAGGCA AAAGAGTTCA TTTACCTTCC AGCTTAGGAA CCTAAGAAAT
  CATAATGTTC TGTCAGCCAC AAGCAGAGTC AGTAGGCCTC CTACTTCATG GAGATCGGTC
  CCTGGGCCAG TTGTTTCTGG TTTTTTTCAT CACAGACACC TGTGAGCATA CAAGTCAGGC
  CCTTCAGTGT GTAGCTTCTT TGAATCTCAT CAGCTCTTGT GGTTCCTGCA TTACTTGACC
  ATACCTTCAG ACACAGCTGA AGGCCTAGTT TTGTGTGTGT GTATGTGTGT GTGTGTGTGT
  R
  TGTGTGTGTG TGTATGTGTG TATGTGTGTG TGTGTGTGCC CTCAGGTTCA TGTTCTGATC
  TAATGCAGAC GCTTGAATGC TGCCTCCTCA GCCTGCCACA GGAGGTAGCC CTTGACTAAT
  AAAGAAACAG TCCCAAGGAA ATACAGTTTA AAGATCGTTA CAACAGTTAA AGGGTTTCTC
  CACAGAACAA ATTTTCTGAT ATTAGAAAAG GCCTGCCCAA TGAATAAAAG CTTTTCCACA
  CTCCTTACAT TCATATGATT TTACCCCAGC AGGAGTAGCC CTATCAAACA AGGGGGGGAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	DBA/2J
ss45448567	mCV25453641	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	DBA/2J
rs30614964					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7711464 () rs orientation: forward

Symbol	Name	Function Class
Gm16685	predicted gene, 16685	within coordinates
Rr573264	regulatory region 573264	1918 bp distal
Rr573265	regulatory region 573265	733 bp distal
Tssr28315	transcription start site region 28315	1797 bp downstream
Tssr28316	transcription start site region 28316	392 bp upstream
Tssr28317	transcription start site region 28317	507 bp upstream
Tssr28318	transcription start site region 28318	537 bp upstream
Tssr28319	transcription start site region 28319	669 bp upstream
Tssr28320	transcription start site region 28320	697 bp upstream
Tssr28321	transcription start site region 28321	751 bp upstream