rs30614920 SNP Detail

Summary

• ID
  rs30614920
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:124939470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGC AGTTTCCTAC AAGTTTTCTG
  Y
  ACCAATTATG GTCTAACACT GCAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45947436	mCV22300858	ABI	CRAMUS_MOUSE	f	SNP		T	C			C
ss60940871	NES16182884	PERLEGEN	MM_PANEL2	f	SNP	T			T	C		C		C	C	C		C
ss133612409	ENSMUSSNP6811951	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C			C
ss321938156	CHEV_6_124912525	CHEVERUD	SCREENING_POP	f	SNP								C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30614920					SNP	T	T	C	T	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60940871	NES16182884	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:124939470 () rs orientation: forward

Symbol	Name	Function Class
Cops7a	COP9 signalosome subunit 7A	Intron
Gm23851	predicted gene, 23851	1778 bp upstream
Tssr63234	transcription start site region 63234	69 bp upstream