rs30592196 SNP Detail

Summary

• ID
  rs30592196
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:76751934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCAGCAGCTG TCATAGGACA GGTTGCCTTG GTGCGCCATG CTTCAGCAGT TTGTAGATAG
  ATGCTAAGTG TCAGTTGAAT GTCTGGGGAA GGGAACTGAA GGACCACTAC CAAGACTTGT
  TTAAAAAAAA AAATCTGGGC ACCTAAAACA GAAAACTTTC ATGCACAAAA CCCAAAACTT
  AGGTTTCTTA GCCAAGGCTC TTTTTTTTTT TTTTTTTTTT TTTGCTGTGG ACCCGCCCCC
  TGGTGTCTAT GAAACCCACA TAACTTCTTC AAATTTTCTA GGTAGAGAGA CGACATAGAG
  R
  ACTAAAAGAG AATTTTTTGT TCTGAAATAC AGTTAGCACA ATATTTTAAG AAATAAAGTT
  TATGGTTCTA GGAATCCTTG TTTATTAACA GACTAAATAA CAAGGTCTAG GAGCAGGTTT
  CAATAATGAC TGTAATTTTG AAGCAGTAAT GGGTTTAATG ACATTTTCAA CCACCTGACA
  CAACTGTCAC AGATCTGAAA ATAGTGATGA TGTTCCCAGA GACCACTGGA GATGTGGTTG
  TGGCGATGTA TGTTGCTGAA GGAGACACTG GCAAAGATCA ATGTAACCGA GACTTTTTTT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39200894	mCV23494516	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss139757446	ENSMUSSNP1782488	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30592196					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:76751934 () rs orientation: forward

Symbol	Name	Function Class
4930444M15Rik	RIKEN cDNA 4930444M15 gene	64 bp downstream
E130202H07Rik	RIKEN cDNA E130202H07 gene	1264 bp upstream
Gm63554	predicted gene, 63554	within coordinates
Rr389872	regulatory region 389872	366 bp upstream
Rr495676	regulatory region 495676	834 bp distal
Rr495677	regulatory region 495677	226 bp distal
Tssr126731	transcription start site region 126731	1448 bp upstream
Tssr126732	transcription start site region 126732	1482 bp upstream
Tssr129811	transcription start site region 129811	991 bp downstream
Tssr129812	transcription start site region 129812	1026 bp downstream