rs30556795 SNP Detail

Summary

• ID
  rs30556795
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7708998 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGGTATCCGC TGACCCTGCT CCCAAGGTAG CCCGGTGCTG GCGCCTACCA GAAGGGACTT
  GTGTCCCTGG TCAGGCAGGG TTTTCTGCTT CCCTAATAAA TGCTGTCTCA GGTCCCACAC
  GATTGGATTG GAACAGAAGT TGTGTGCCAC TCACCAGAGG TCCTAAGACC CCGTGGAGAG
  TACTCTGGGG ACCTTGGGGG TGTCTGCTGA CTCAGTGCCC AAGGTGATCT GGTGCTGGCG
  CTGACCGGAA GCCAAAGCCA TACTTTTATG AGAATGAGTT TTTGTTAATT TAAAAAAAAA
  W
  ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATCCCCAATT AAAGAAACCC
  TCATGGGATT CTTTCTCTTT AAATAAAGTC TATCATTGCT ACTCAGTAAC AGAAGAAATG
  ATATAAATAA CATACACACT GTACAACATA TTGGTTACAG TCATGTAAAA TGTCAGTCTC
  TTCATTGTTC TTGAGGCCAC AGGTTTTGTC TTGTTTGTGA GCCTCAGAAT AGTTTTCTCA
  ATTTTTTTTT CTAGAATTTT GTCCATTTTA AAAGTGTTTT TCTTTAACTA ATTTATCTTC
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45442424	mCV25453661	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30556795					SNP	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7708998 () rs orientation: forward

Symbol	Name	Function Class
Gm16685	predicted gene, 16685	within coordinates
Rr573264	regulatory region 573264	527 bp proximal
Rr573265	regulatory region 573265	1508 bp proximal
Tssr28315	transcription start site region 28315	630 bp upstream