GGCTA GTTTTGTTTT GTTGTTTTTG K TTTTTTTTCG AGACAGGGTT TCTCT K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss45439448 | mCV25061968 | ABI | CRAMUS_MOUSE | f | SNP | T | T | G | ||
ss320841254 | CHEV_3_95755455 | CHEVERUD | SCREENING_POP | f | SNP | G | T | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs30548289 | SNP | T | T | G | G | T |
Location: Chr3:95858844 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi13530 | CpG island 13530 | 42 bp distal | ||||||
Gm56819 | predicted gene, 56819 | 241 bp upstream | ||||||
Gm65572 | predicted gene, 65572 | within coordinates | ||||||
Rr375411 | regulatory region 375411 | within coordinates | ||||||
Rr581095 | regulatory region 581095 | 252 bp distal | ||||||
Rr581096 | regulatory region 581096 | 194 bp distal | ||||||
Rr581097 | regulatory region 581097 | within coordinates | ||||||
Rr581098 | regulatory region 581098 | 1566 bp proximal | ||||||
Tssr30663 | transcription start site region 30663 | 446 bp downstream | ||||||
Tssr30664 | transcription start site region 30664 | 165 bp downstream | ||||||
Tssr34570 | transcription start site region 34570 | 496 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/18/2025 MGI 6.24 |
![]() |
|