rs30514642 SNP Detail

Summary

• ID
  rs30514642
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:154429486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGGTTCTGA CTTTTCTATA TTGTGTTTAG GGGTATGGGA
  GTATTTGGAG TCAATGTGAA CTCTCACCCC TAGGACCCAG GTACAGCTAA GCTAGTGAAG
  Y
  GCCTACTTCT CAGGGTGGTG TCTGATTTCA AGTGTTCACC TGTGACCTGT CAGAGGCCCA
  GTCCCTCTAC TAGTTGATCT ATTTGTGTAG TATTAGTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45438176	mCV22840553	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	C
ss136118440	ENSMUSSNP1026507	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30514642					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154429486 () rs orientation: forward

Symbol	Name	Function Class
Erich3	glutamate rich 3	Intron
Rr587891	regulatory region 587891	202 bp distal
Rr587892	regulatory region 587892	343 bp distal