rs30411688 SNP Detail

Summary

• ID
  rs30411688
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119392719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAGCAGCATT CCTTTACCAC TTTTGCATCA GTCCTACCTC CACCTTCCTG CCCAGACTTC
  CTTCAGTGAG GGACTCTGAC GTGGAAGTAT GAGCTGAAAT AAACCCGTTC CTGCTAAGGT
  TGCCTTTGAT CATGGGTTTT GATCGCAGCA ATAGAAACCC CAGTTAAGAC AGCTCAGCAG
  AGTGGTAGCA CCTGTATGAA GTCCCAGCAG CTCCAGAAGG ACTTGGAGGT TGATTTGGGC
  AACATAGAGA GATCCATTAC TACAAGTGGT CAGGGTCTGT ATGTGTGTGT GTGTGTGTGT
  R
  TGTATGTGTG TGTGTGTGTT CAGGTTTGTG GCCTCTTACT CAGTGAACTG AAATAATTGC
  ACACAGATCT GCAAAGTAGC AAGGGAACTT TGTTAAGCGC AAAGCCATAG AACAGACTCA
  AAAGGAACGT GTTGCTCAGA TGAGAACGGC CCATTTGGGC GAAGAAACTC AAGGGTCCAG
  TCATTATTCA GAGCTTGTTA GGATTTAGTG GCAGAGGACC TTAGTGGATC GGAGCCAAGG
  AATGCCACAG CAGAGCTCAT CATACCACAC AAGATTTCTC TAAGAGATTT ATTGGGCTGG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45925309	mCV22293920	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30411688					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119392719 () rs orientation: forward

Symbol	Name	Function Class
Adipor2	adiponectin receptor 2	Intron
Rr637669	regulatory region 637669	617 bp distal
Rr637670	regulatory region 637670	1520 bp proximal
Rr637671	regulatory region 637671	1936 bp proximal
Tssr62716	transcription start site region 62716	1721 bp downstream
Tssr62717	transcription start site region 62717	1789 bp downstream
Tssr62718	transcription start site region 62718	1841 bp downstream
Tssr62719	transcription start site region 62719	1920 bp downstream