rs30329992 SNP Detail

Summary

• ID
  rs30329992
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17108549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACAGTGATCT CTGCTTTTCC TGTCCTCCAA ACAGCAGTGG GAACTCAAGA GCAGTGGGTT
  CAGTGAGGAA GGAGAAGGGG GAAATGTCTT GGGGTCCAGG AAATTCAAAG GAAGATGCAG
  ACTCAGCATC AGCTTCTACA CAGTGGTCCA TGAGAGATGC TTCATACCCT CCCTGGATGC
  TCATTGATTG TGAACTACTA CTTCAGGGAG GCTGCACGTA CACTGTTCAT CTCTAAATAG
  AACAATCTTG GATACAAATA GGATTTGAGA AAGTGATGTT TTGCATATAT ATATAAATAT
  R
  TATATATATA TATATATATA TATATATATA TATATATATA TGTAATTTCC ACTGATGGAA
  TCCCAGTCGC TCAGGTGTCC TGTTGGCCTT CACATTTGGG ACATTTTTAA CAATTTTTTT
  TGTTTTTAAC TTCTTATTGT ATATGAATTA TACACCATGC ACCCCCAATC CCACTCATCT
  CGTCACCCCT TTACAGCATC TATATCTCAA GTCCTGGGGT ATCTTCTCCA TCCTTGCAAC
  CTCCCCTCAA AAAATAGAAA TAAAAATAAA AAAATTTAAA ACCTCAAAAT CAAAACAAAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45918483	mCV24739077	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30329992					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17108549 () rs orientation: forward

Symbol	Name	Function Class
Gm4876	predicted gene 4876	within coordinates
Gm53251	predicted gene, 53251	within coordinates
Rr626766	regulatory region 626766	551 bp proximal