rs30322829 SNP Detail

Summary

• ID
  rs30322829
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119393397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCC CGAGTGCTGG GATTAAAGGC
  R
  TGCGCCACCA CGCCCGGCGC CACCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45918501	mCV22293921	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss133589312	ENSMUSSNP1758124	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
ss321927888	CHEV_6_119366454	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30322829					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119393397 () rs orientation: forward

Symbol	Name	Function Class
Adipor2	adiponectin receptor 2	Intron
Rr379997	regulatory region 379997	1997 bp upstream
Rr637669	regulatory region 637669	1295 bp distal
Rr637670	regulatory region 637670	842 bp proximal
Rr637671	regulatory region 637671	1258 bp proximal
Rr637672	regulatory region 637672	1940 bp proximal
Tssr62716	transcription start site region 62716	1043 bp downstream
Tssr62717	transcription start site region 62717	1111 bp downstream
Tssr62718	transcription start site region 62718	1163 bp downstream
Tssr62719	transcription start site region 62719	1242 bp downstream