rs30261811 SNP Detail

Summary

• ID
  rs30261811
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43611624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCAGTGGA AATAGACATT
  CTTTTTAGTT TAAGCTGGAA GAAAAGATGA GTGGAATTAT TGGGTTGTGG AAAGACAGCA
  GTGGTATGTG GGTTAGCTGT GTGACTGCTT AAAAAAAAAG TCACCGTTTC AAGTCATTTA
  GTGGTGTGAC CAGAATATTT CTATATATTC ATAACTGAAT AATTATGAAG ACAAACACTT
  S
  TAATCTTGAG AGCAGAAAGC AAACACCATA TTGGCTCTAG CAAAGGCTAA CGCTGAATCT
  AGATTTATCA AGAGTTTTCT TTATTACAAC AATGACTTTA TATTGATGCT TTAAAGGATA
  GAAATTAAAA GTATATAGGC ATAAACACTG CCCTGAGGCA AAATGGAATG TTACTAAAAT
  TCTTAGCCCT GTCTCCTCAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39663809	mCV23924709	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	C
ss147018556	ENSMUSSNP7037083	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		C
ss325600654	CHEV_18_43638213	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30261811					SNP	C	G	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43611624 () rs orientation: forward

Symbol	Name	Function Class
Eif3j2	eukaryotic translation initiation factor 3, subunit J2	763 bp upstream
Gm54727	predicted gene, 54727	782 bp upstream
Gm58438	predicted gene, 58438	within coordinates
Rr537089	regulatory region 537089	491 bp distal
Tssr153167	transcription start site region 153167	758 bp upstream