rs30258470 SNP Detail

Summary

• ID
  rs30258470
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:154429323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAGCTGATT CCAGATGTTG TCAAGAAGAG ATGTGAGATG
  AGCCCCACAT CATTTCTCCT CACTAGATTG TTAACACAGA TCGGATTGCC CTTTTCCCTC
  K
  GTGTGGACCT CCAACTTCCT ATTCCCTTAC ATGTACCTAC ATATATTACA TATTATGCAC
  TTTGGGTTCT GACTTTTCTA TATTGTGTTT AGGGGTATG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45411345	mCV22840555	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T	G
ss136118434	ENSMUSSNP3246415	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30258470					SNP	T	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154429323 () rs orientation: forward

Symbol	Name	Function Class
Erich3	glutamate rich 3	Intron
Rr587891	regulatory region 587891	39 bp distal
Rr587892	regulatory region 587892	180 bp distal