rs30118988 SNP Detail

Summary

• ID
  rs30118988
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:76751918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAAGGGAA CTGAAGGACC
  ACTACCAAGA CTTGTTTAAA AAAAAAAATC TGGGCACCTA AAACAGAAAA CTTTCATGCA
  CAAAACCCAA AACTTAGGTT TCTTAGCCAA GGCTCTTTTT TTTTTTTTTT TTTTTTTTTG
  CTGTGGACCC GCCCCCTGGT GTCTATGAAA CCCACATAAC TTCTTCAAAT TTTCTAGGTA
  R
  AGAGACGACA TAGAGAACTA AAAGAGAATT TTTTGTTCTG AAATACAGTT AGCACAATAT
  TTTAAGAAAT AAAGTTTATG GTTCTAGGAA TCCTTGTTTA TTAACAGACT AAATAACAAG
  GTCTAGGAGC AGGTTTCAAT AATGACTGTA ATTTTGAAGC AGTAATGGGT TTAATGACAT
  TTTCAACCAC CTGACACAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39153256	mCV23494518	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss139757440	ENSMUSSNP5357252	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30118988					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:76751918 () rs orientation: forward

Symbol	Name	Function Class
4930444M15Rik	RIKEN cDNA 4930444M15 gene	80 bp downstream
E130202H07Rik	RIKEN cDNA E130202H07 gene	1280 bp upstream
Gm63554	predicted gene, 63554	within coordinates
Rr389872	regulatory region 389872	382 bp upstream
Rr495676	regulatory region 495676	818 bp distal
Rr495677	regulatory region 495677	210 bp distal
Tssr126731	transcription start site region 126731	1464 bp upstream
Tssr126732	transcription start site region 126732	1498 bp upstream
Tssr129811	transcription start site region 129811	1007 bp downstream
Tssr129812	transcription start site region 129812	1042 bp downstream