rs30072044 SNP Detail

Summary

• ID
  rs30072044
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121439429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATGGGTGGC TTGTGAGAAC AGCCAGAGGA CAGGCTGGCA
  GGCCAACTCC GCAAGGAGGC TGAGACATGA TGCATTTCAC ATAAAGACCT CGGACGGCCC
  Y
  GCAGCTGGGC TCTGCAGTGT TGAGTGAAGA AGAAACCTAC AGCGATTGGC TTTCTGGTTC
  TGTATTTTTC AGAGTGATTA GAGGGAGGGC AGTTTAGCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45392872	mCV23895875	ABI	CRAMUS_MOUSE	f	SNP		C	C	T
ss135725844	ENSMUSSNP2521025	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
ss320904502	CHEV_3_121348698	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30072044					SNP	C	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121439429 () rs orientation: forward

Symbol	Name	Function Class
A730020M07Rik	RIKEN cDNA A730020M07 gene	within coordinates
Rr584137	regulatory region 584137	1967 bp distal
Rr584138	regulatory region 584138	within coordinates