rs30063717 SNP Detail

Summary

• ID
  rs30063717
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95856446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAAAGACTTA CTGACTGACT TTTAACTTAA GAGTATATGT GAGCCTTCAG ATCCCTTGGA
  ACAAAGATTT TTTTGGCTGT GTAAGCTGGT AACTCACCTG AGCCTCTGTA AGAGCAGCAA
  GTGCTCCTAA CTGCAGAGCC ACCTTCAGCT CAAGTTCAAG TTGTTCAAGT CTTAGGGCTT
  CTTAACCTGC TAAGACCCTA TAGTAGGGTA ACCGTGACTA AGAAAGACGA AGGAAAGTAT
  GTATTTCAGT TAAGTTCTTG AATATTTCCC TGTGTGTGTG TGTGTGTGTG TGTGTGTGAG
  W
  GAGAGAGAGA GAGAGAGAGA GAGAGAGAGC ATCATTTGGA TGCCTCCTTA GAGAAATGTG
  CATCCACCAT TAAATACATA GACTGTAAGA GGGCCATAAT CTCAACCCTA CGCACTGCCT
  ATGACTGACT TCCTGGGCAG GGTCACTCCA CAGGGCGGAG TGGGTTCTCC ACCCAGAGAA
  AAGAGCATAC AATCTTTGAT AGCGACATAT GATCGGTGTT GGCTTTTACA AACTTCACAC
  TAGAGAACAT GAAATCGAGG TTTTGTTTTG TTTTAAGCAA AAACAACCCT CAATGTTAAT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45392053	mCV25061955	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30063717					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95856446 () rs orientation: forward

Symbol	Name	Function Class
Anp32e	acidic nuclear phosphoprotein 32 family member E	1747 bp downstream
Cpgi13530	CpG island 13530	1566 bp proximal
Gm56819	predicted gene, 56819	871 bp downstream
Rr375411	regulatory region 375411	1316 bp upstream
Rr581095	regulatory region 581095	1305 bp proximal
Tssr30663	transcription start site region 30663	1924 bp upstream
Tssr34570	transcription start site region 34570	1883 bp downstream