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rs30063717 SNP Detail
Summary
  • ID
    rs30063717
  • Variation Type
    SNP
  • Alleles
    A/T
Genome Location and Flanking Sequence
  • Location
    Chr3:95856446 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                                     
    CAAAGACTTA CTGACTGACT TTTAACTTAA GAGTATATGT GAGCCTTCAG ATCCCTTGGA
    ACAAAGATTT TTTTGGCTGT GTAAGCTGGT AACTCACCTG AGCCTCTGTA AGAGCAGCAA
    GTGCTCCTAA CTGCAGAGCC ACCTTCAGCT CAAGTTCAAG TTGTTCAAGT CTTAGGGCTT
    CTTAACCTGC TAAGACCCTA TAGTAGGGTA ACCGTGACTA AGAAAGACGA AGGAAAGTAT
    GTATTTCAGT TAAGTTCTTG AATATTTCCC TGTGTGTGTG TGTGTGTGTG TGTGTGTGAG
    W
    GAGAGAGAGA GAGAGAGAGA GAGAGAGAGC ATCATTTGGA TGCCTCCTTA GAGAAATGTG
    CATCCACCAT TAAATACATA GACTGTAAGA GGGCCATAAT CTCAACCCTA CGCACTGCCT
    ATGACTGACT TCCTGGGCAG GGTCACTCCA CAGGGCGGAG TGGGTTCTCC ACCCAGAGAA
    AAGAGCATAC AATCTTTGAT AGCGACATAT GATCGGTGTT GGCTTTTACA AACTTCACAC
    TAGAGAACAT GAAATCGAGG TTTTGTTTTG TTTTAAGCAA AAACAACCCT CAATGTTAAT
                                                                     
    
    W = A/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss45392053 mCV25061955 ABI CRAMUS_MOUSE f SNP A A T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs30063717 SNP A A T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:95856446 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Anp32e acidic nuclear phosphoprotein 32 family member E 1747 bp downstream
Cpgi13530 CpG island 13530 1566 bp proximal
Gm56819 predicted gene, 56819 871 bp downstream
Rr375411 regulatory region 375411 1316 bp upstream
Rr581095 regulatory region 581095 1305 bp proximal
Tssr30663 transcription start site region 30663 1924 bp upstream
Tssr34570 transcription start site region 34570 1883 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory