rs30009447 SNP Detail

Summary

• ID
  rs30009447
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:83899292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA ATTCAGGTTT TCAGCAGAGT
  R
  GAAAAGCAAG CCCCAGCCTT CCACC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45386222	mCV23526116	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss135419357	ENSMUSSNP6377884	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30009447					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83899292 () rs orientation: forward

Symbol	Name	Function Class
Rr578944	regulatory region 578944	226 bp proximal
Rr578945	regulatory region 578945	784 bp proximal
Rr578946	regulatory region 578946	1476 bp proximal
Tmem131l	transmembrane 131 like	Intron