rs29928063 SNP Detail

Summary

• ID
  rs29928063
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103671463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAC TGTATTAAAG GGTTGCAGCA
  Y
  TAGGAAGGTT GAGAACTGCT GCTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45378671	mCV22333303	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147139738	ENSMUSSNP1831978	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss320442894	CHEV_2_103681275	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29928063					SNP	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103671463 () rs orientation: forward

Symbol	Name	Function Class
Gm13875	predicted gene 13875	1883 bp downstream
Gm56363	predicted gene, 56363	1914 bp downstream
Gm75184	predicted gene, 75184	within coordinates
Rr373620	regulatory region 373620	796 bp upstream
Rr561947	regulatory region 561947	1295 bp proximal