rs29927391 SNP Detail

Summary

• ID
  rs29927391
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:116326007 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAAT TGTATGACAT AAAGGGTTAG
  R
  TATAACACTA TTCAGGACAA AGGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45878168	mCV27550615	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	A
ss133575969	ENSMUSSNP6465985	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29927391					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:116326007 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Marchf8	membrane associated ring-CH-type finger 8			Intron
				mRNA-UTR
Rr637191	regulatory region 637191			791 bp distal
Rr637192	regulatory region 637192			419 bp proximal
Tssr58369	transcription start site region 58369			1856 bp upstream