rs29926127 SNP Detail

Summary

• ID
  rs29926127
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:81963737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAACT GAAGAGTTGG ATGCCAGGAC
  Y
  CATGTGACAG AAAGAGAGAA CTGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45875580	mCV23926359	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss133338817	ENSMUSSNP6999101	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss321840801	CHEV_6_81936750	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29926127					SNP	T	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:81963737 () rs orientation: forward

Symbol	Name	Function Class
Gm20383	predicted gene, 20383	within coordinates
Gm44202	predicted gene, 44202	within coordinates
Rr632571	regulatory region 632571	2 bp proximal
Rr632572	regulatory region 632572	401 bp proximal
Rr632573	regulatory region 632573	820 bp proximal