rs29917515 SNP Detail

Summary

• ID
  rs29917515
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129087398 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTT TTGTTTTGTT TTGTTTGTTT
  R
  TTTGTTTTTC CTTTCTATAT TCGCG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45376663	mCV24474026	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss147584320	ENSMUSSNP5167144	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss320504483	CHEV_2_129071214	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29917515					SNP	G	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129087398 () rs orientation: forward

Symbol	Name	Function Class
Gm14024	predicted gene 14024	898 bp upstream
Rr373845	regulatory region 373845	464 bp upstream
Rr564889	regulatory region 564889	1882 bp distal
Rr564890	regulatory region 564890	1262 bp distal
Rr564891	regulatory region 564891	819 bp distal
Rr564892	regulatory region 564892	302 bp distal
Rr564893	regulatory region 564893	31 bp proximal
Rr564894	regulatory region 564894	1989 bp proximal
Tssr20109	transcription start site region 20109	879 bp upstream