rs29776835 SNP Detail

Summary

• ID
  rs29776835
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:112358848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAG TCCGACAGAT CCCCCAGACT
  Y
  GCTCGGCCAC AGGCCAGCCT GATCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45860516	mCV23097021	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss149079302	ENSMUSSNP2352350	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29776835					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:112358848 () rs orientation: forward

Symbol	Name	Function Class
1700028D13Rik	RIKEN cDNA 1700028D13 gene	980 bp downstream
Rr617283	regulatory region 617283	362 bp distal
Rr617284	regulatory region 617284	670 bp distal
Rr617285	regulatory region 617285	within coordinates
Rr617286	regulatory region 617286	1610 bp proximal