rs29719603 SNP Detail

Summary

• ID
  rs29719603
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:105352646 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAGCAGGAA GGCTTCCTTG GTGGCAATGA GCAGACACAT
  GCCTGGCTTC CCTGGCAGCA GACGGAATGG GAAGAGATAA TCCCCCTGTC ATCAGGCCCC
  R
  CACCCCCTCA AGACTCCAGC ACTGGCTCCT GTAACATGTG CTCACCTTGA TTTATGGTTG
  ACCTTGGGAA AGCCAGCCTC TGACTTTGGC AGCCTGTCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45356133	mCV22346477	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	G
ss147167773	ENSMUSSNP353686	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
ss320447914	CHEV_2_105362458	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29719603					SNP	A	A	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:105352646 () rs orientation: forward

Symbol	Name	Function Class
4930527A07Rik	RIKEN cDNA 4930527A07 gene	within coordinates
Rr562247	regulatory region 562247	within coordinates
Rr562248	regulatory region 562248	879 bp proximal
Rr562249	regulatory region 562249	908 bp proximal
Rr562250	regulatory region 562250	1086 bp proximal
Rr562251	regulatory region 562251	1361 bp proximal