rs29680262 SNP Detail

Summary

• ID
  rs29680262
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:112356822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCC CAGGTCCAAA AGAAACCACA
  R
  TGGGGATGAA GTAGGCCTGG CCATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45851924	mCV23097011	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss149079287	ENSMUSSNP3515900	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss321645073	CHEV_5_112637976	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29680262					SNP	G	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:112356822 () rs orientation: forward

Symbol	Name	Function Class
1700028D13Rik	RIKEN cDNA 1700028D13 gene	within coordinates
Rr617282	regulatory region 617282	1798 bp distal
Rr617283	regulatory region 617283	1068 bp proximal
Rr617284	regulatory region 617284	1335 bp proximal
Rr617285	regulatory region 617285	1904 bp proximal