rs29668185 SNP Detail

Summary

• ID
  rs29668185
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153506640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATCTTACA CACTGGAGAC
  AATTCCAGTG ACTTCAACTC TTGAGCTGCG GTTGGGTCTC AGGCTGTTTC CTGTCTTTGT
  GCTGGGATTG CAGGCAGGTG ACACCCCCAC AGCTGATTAA CTATCAACGT TCCACAGAGT
  TTGAATAAAT GGCAGCAGCA GGCAAGCACA CACCATGTGC TGAGTAAACT GTGCTTTTCT
  K
  CTCTGCTCTC TTCCAGTGCC TTCTTGAGTA AGCCGGTATC AAGGCCTGTG CTTCTCCTGG
  AATAATAATA CTTGGTTTAA GTCAGTGATT GAGACCTGTG GGTCTCAGTG CTGTTGGGAG
  GGGGTTAGAA GACCCTTTCA CAGGGTCACA TATCAGATAT GCTCTGTATC AGTTACATTG
  TGATTCATAA CAAATGTGGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45350002	mCV23544227	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T	T
ss148000221	ENSMUSSNP3284245	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29668185					SNP	T	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153506640 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnmt3b	DNA methyltransferase 3B			Intron
				Noncoding-Transcript-Variant
Rr567718	regulatory region 567718			788 bp distal