rs29573756 SNP Detail

Summary

• ID
  rs29573756
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:168009844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGAAAACA ACTGGATGGA
  GTCTGGAGTC GGCCTTTCTA CCTTTTATAT GAATTCTAGG GGTCAAGCTC AGGCCACCAG
  GCCTACATGG CCAAGGCTTT ATCTGTTGAG CTGTTTTTCG GGCCCAAAGG ATTCTCTGTG
  CTGGAGACCC TCCATGGAGT GACCCCACAG CCCAGACCAA GTGCTGTGCC TGTGCCTTGC
  M
  GGTCTCTGTG GTCCTGGTGA CTCATCATGA CAAGGAAGCA TTGTAGTCAG GCTCTGCACG
  GCCAGGCAGG GCAGCAACCC CACTGAGCCA TGCTTCATTT TTTCCTTCTG TGACCCAAAG
  CCCTGAAGTG GCCATTTGAG TTGTTTGGGC TTCTTAGGGA ACTAGACAGA GCTATATATT
  TCTGGCCACT GTTCTGATAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45339830	mCV22944594	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss148267276	ENSMUSSNP5004463	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29573756					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:168009844 () rs orientation: forward

Symbol	Name	Function Class
Gm52960	predicted gene, 52960	within coordinates
Gm54130	predicted gene, 54130	514 bp upstream
Rr570912	regulatory region 570912	465 bp distal
Rr570913	regulatory region 570913	660 bp proximal
Rr570914	regulatory region 570914	1297 bp proximal
Rr570915	regulatory region 570915	1798 bp proximal