rs29547530 SNP Detail

Summary

• ID
  rs29547530
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:145651653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGTCCTGG AACTCACTTT GTAGACCAGG CTGACCTCGA
  ACTCAGAAAT CCACCTGCCT CTGCCTCCCA AGTGCTGGGA TTAAAGGCGT GAGCCACCAC
  Y
  GCCCGGCCAG ATCAACAGCT TTAAGAACTG TTTCCAAGTA GCAGAAACTA TTAAATGAAG
  AGTCAGTGGA AGACCAGGGT CATAGTGTCT TACTGCACT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45333949	mCV22530315	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss147846473	ENSMUSSNP329824	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29547530					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:145651653 () rs orientation: forward

Symbol	Name	Function Class
Rin2	Ras and Rab interactor 2	Intron
Rr566581	regulatory region 566581	1030 bp proximal
Rr566582	regulatory region 566582	1109 bp proximal