rs29524749 SNP Detail

Summary

• ID
  rs29524749
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103671098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGGG CCATTTGTGT TATATCCCTC
  R
  AAGAATCTGT CTGAATCCTG AGAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45328607	mCV22333281	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss320442891	CHEV_2_103680910	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29524749					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103671098 () rs orientation: forward

Symbol	Name	Function Class
Gm13875	predicted gene 13875	1518 bp downstream
Gm56363	predicted gene, 56363	1549 bp downstream
Gm75184	predicted gene, 75184	within coordinates
Rr373620	regulatory region 373620	1161 bp upstream
Rr561947	regulatory region 561947	1660 bp proximal
Tssr19174	transcription start site region 19174	1825 bp downstream