rs29517179 SNP Detail

Summary

• ID
  rs29517179
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127103098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGGTTAGTT AATAAAAGAA CTTCCAAAGA GGCTGTTTCC
  GGTCTACTCT TTACATGGCT CTCTCAGAGT GCAGGACCTG TAGGTGTCTT CATTTGAACT
  M
  TCTTGTCCTG ACTATCCCTA AAAAATGGCA ACCCGCTTCC TAAGAGAACA CCTTGTGGCG
  AGGTAGACCA TGTACCCCAT ATGTTTGTCT GTTTTGCTG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45324324	mCV22837331	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss147524727	ENSMUSSNP4484781	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs29517179					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127103098 () rs orientation: forward

Symbol	Name	Function Class
Rr564482	regulatory region 564482	1504 bp distal
Tmem127	transmembrane protein 127	70 bp downstream
Tssr20002	transcription start site region 20002	936 bp upstream