rs29507865 SNP Detail

Summary

• ID
  rs29507865
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:113892651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAG TTAAAAAAAT AAAATTAAGG
  Y
  TGGCCTTGAA TGAATAGGTG TTGTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45323177	mCV25104544	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147246076	ENSMUSSNP1357060	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss320462369	CHEV_2_113887906	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29507865					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:113892651 () rs orientation: forward

Symbol	Name	Function Class
Actc1dt	actin, alpha, cardiac muscle 1 divergent transcript	665 bp downstream
Gm46757	predicted gene, 46757	1875 bp upstream
Rr562822	regulatory region 562822	1939 bp proximal
Tssr19457	transcription start site region 19457	994 bp downstream
Tssr19458	transcription start site region 19458	975 bp downstream