rs29352277 SNP Detail

Summary

• ID
  rs29352277
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3669497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATGCCCT CATCTGAGTG
  TGAGCTAAAG GGATGCTGCT TTCCCCTGAT AATTTGTCTT CTTTTTTAAA AAATTTCAAT
  AAAATGGCAT ATTGGTGATT GTCAAATATT AAAGAAATTC TTTTGCCTTT GTTGTAAAGA
  ACAAAGATAA ATTTCCTTGG GATCTGGATT TATGGAGATG GTAAAAGTCC TCATAAATGG
  R
  TTCCAGGTGA TAGACCCAAC TGGCTGTCAG GCCACCCTTG GGTTACTACA TGGATATTAG
  CATAACTCAG AAATATTGGC AGAACAGGTA TGCTGATGTT TTTCTTCTAC CATGTCTTTG
  GAAGGATTTC CACTGAAGTT ACAATGCCCA GGATAACTTA GGAACAGGGA AACACTGCAA
  ATCCCAACCT TCCTCCAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38594050	mCV25387226	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss146748644	ENSMUSSNP2110702	ENSEMBL	ENSEMBL_Sanger	r	SNP	T	T		C
ss323242484	CHEV_10_6627044	CHEVERUD	SCREENING_POP	r	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29352277					SNP	A	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3669497 () rs orientation: forward

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm30164	predicted gene, 30164	1644 bp downstream
Gm56946	predicted gene, 56946	within coordinates
Rr426848	regulatory region 426848	1324 bp distal
Rr426849	regulatory region 426849	676 bp distal
Tssr92213	transcription start site region 92213	1329 bp downstream