rs27633017 SNP Detail

Summary

• ID
  rs27633017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144599636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTAC TTTTGCACAG TTGCCATAGC
  R
  ATGCAATAAA CATTTAAAGG TCCAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss37800157	NES09124352	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	A	A		G	A	A	A		G
ss45699347	mCV22759452	ABI	CRAMUS_MOUSE	f	SNP	G					A
ss321410530	CHEV_4_144462969	CHEVERUD	SCREENING_POP	f	SNP									A					A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs27633017					SNP	G	G	G	G	G	A	A	A	A	G	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37800157	NES09124352	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144599636 () rs orientation: forward

Symbol	Name	Function Class
Gm57096	predicted gene, 57096	within coordinates
Rr604241	regulatory region 604241	228 bp distal
Rr604242	regulatory region 604242	67 bp proximal