rs27536304 SNP Detail

Summary

• ID
  rs27536304
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:120464224 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCCTGCCT CCCTCCCTCC CTCCCTCCCT CCCTCCCTCC
  CTCCCTCCCT CCCTCCCTCC CTCCCTCCCT CTCTGCCCTG GACCTGCTTG TACCAGCTCA
  S
  CCATGCCCTT ACCTTTACCC CTCGAGAGGA GGTTACAGTG CTGCTGGCCA GGTAAACTTC
  CTTTCCCCAG CAGCACACAG AGTTCTTATG CAAATGAGAC                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37712343	NES09209556	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27536304					SNP	C	C	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37712343	NES09209556	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:120464224 () rs orientation: forward

Symbol	Name	Function Class
Gm8439	predicted gene 8439	Intron
Gm12860	predicted gene 12860	within coordinates
Rr598831	regulatory region 598831	within coordinates