rs27255491 SNP Detail

Summary

• ID
  rs27255491
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:132443710 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGTACTAGG TGGAAGGGCA TGGCTCGGGA GGGGCTGAAG
  AGGACCTAGA GAAGCATCAA CCAAAACAAA GTAGCTAAGA AAAGCCAGAG TGACTCTTGT
  K
  ACTCTGTATG CTAATCAAAA CCCTTAAAAC TGTAAATAAA TGTATACAGA TACTGGGTCT
  GCTTGTACAT GCCTATGATC AGCACTGTGG AAATGACAGA                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss37464711	NES08978822	PERLEGEN	MM_PANEL2	f	SNP	T	T	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs27255491					SNP	T	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37464711	NES08978822	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:132443710 () rs orientation: forward

Symbol	Name	Function Class
AU019990	expressed sequence AU019990	within coordinates
Gm75202	predicted gene, 75202	620 bp upstream
Rr565501	regulatory region 565501	1200 bp distal
Rr565502	regulatory region 565502	62 bp proximal
Tssr26480	transcription start site region 26480	619 bp upstream