rs265734720 SNP Detail

Summary

• ID
  rs265734720
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105723644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGAGAAAC AGTAAACAAT
  ATTAATTTTC ACAGCATTGT GAAGTTGGTG ACGTCGCTCA AGCATGATGA CAGCTGGTCA
  GTAGGTCACA AGTTCTCCTC GTTGTTATTC CCACAGACTG GGAAGCCAAG GCGGAGAAGG
  ACATGTGAGA CTGGGCAGGC TTCAGCTGTC ATCTGTGGGA AGTGGCTTTT GGTTGACCAG
  Y
  GGTACTTCCC AGTGTCAGCA CGTGTGTTGT GTCGGCAGCT CAGACCTTGC GCTGAGGGGC
  CCCTGTCCTC AGCCACCCTT CATCTTGGGA AAACTCTCTG GTGTAGAGCA GGGAGGTAGG
  GAGGCAGGGA GGCAGGGAGG CAGGGAGGCA GGGAGGCAGG GAGGCTTCCT AGTGCTAACT
  CAACTTGTTT AAACCATTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320863296	CHEV_3_105619246	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265734720					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105723644 () rs orientation: forward

Symbol	Name	Function Class
Gm5547	predicted gene 5547	within coordinates
Rr582787	regulatory region 582787	739 bp distal
Rr582788	regulatory region 582788	458 bp distal
Rr582789	regulatory region 582789	within coordinates
Rr582790	regulatory region 582790	1821 bp proximal
Tssr31084	transcription start site region 31084	773 bp downstream