rs265632321 SNP Detail

Summary

• ID
  rs265632321
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107545181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATACCTCA CATTTTAAAA
  ACAGGCCCCT TAGATGGAGG GTAGACGATC TTTCTCCAGT ACTCACCAAT TCAAACTGTC
  TAAATTTTTC ACTGACCTTG TTATTTAAAA CTATACCTAA AAAATCAGTT TCAGGGGCTC
  TGGTGGCAAG AGCTAGCCAG GGCACTCGGA GGTCAGATGC CTATGACCAT GCATCCTTTA
  Y
  GGGTGTGGGA ACTAGTGGGG GTTTCTTCTC ACACACCAGA AAAAAAAAAG CAGCCTTGGG
  GGTACATGAA CCCTGGTGGC AGGAGTGAGC AGTCAGCTTT TTGTCCCCAG GTTCAGCTGC
  TGGGGGAATC CAAATGGCAG TTACCTCCCA AACCAGCAAA CTACAGCAAG TTACAGCCTT
  CAGAGCCCCA GGTGACACGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250042	CHEV_4_107360589	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265632321					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107545181 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	1616 bp upstream
Gm12899	predicted gene 12899	144 bp upstream
Rr376978	regulatory region 376978	within coordinates
Rr597042	regulatory region 597042	17 bp proximal
Tssr38260	transcription start site region 38260	505 bp upstream