rs265420726 SNP Detail

Summary

• ID
  rs265420726
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138121373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCTAGGGG TTGGCTGGTG
  CCGTTTTCAG ACAAAGCATA TGTTGCTGCC TCCTCCCCTG ACATTCCGGG GAAAGCTTCC
  AGCCAGCAAG CCACAAGCTG CAAGCCGGGG ATCATGGGAG GTGGCTACCG ACTCTTAAAG
  GGGGCATTTT CTGGGCCTTT CTCCTGTCCT TGGGCTATGT AATGACAATC TCACCCCCAG
  Y
  AGGGCTGGCA AACACAACAC AGGAGGGGTG ACAGGCCTGA AAAAGCAGAT TTACTTTATT
  TACAATGATC AGTAGATGAC ATAGATCTTT GGGTTTTGAT GGCCTTGTGG AGACACCTGG
  GCAGGGCTCA CCCCGGTCTC CTTGTTAGTA CCTCCTCCTC CCTCAGCCTG CATGTGAGTC
  CAGCTGTGGT CGGGACCTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321373119	CHEV_4_137949977	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265420726					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138121373 () rs orientation: forward

Symbol	Name	Function Class
AB041806	hypothetical protein, MNCb-2457	1136 bp upstream
Cpgi15151	CpG island 15151	477 bp proximal
Fam43b	family with sequence similarity 43, member B	30 bp downstream
Rr602906	regulatory region 602906	751 bp proximal
Rr602907	regulatory region 602907	1324 bp proximal
Rr602908	regulatory region 602908	1351 bp proximal