rs261032274 SNP Detail

Summary

• ID
  rs261032274
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103667413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGCAACCAT CGCTGTTACC TAGTTTCAGA ATACAAGTGC
  ATCATCATCA ATTATCATCC TCATCATCAT TTTAAAAAAC GTTAGCATGT ACACCCCCCC
  S
  CCCCCCCCCC CCCACACACA CTCCAGTGCT TTTCAAGCCA TCAGGACACA GGCACCCTCA
  AAGCCATTCA TCTTCTCGGC CCTTCTGCTG AAGGCTTTG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	C57BL/6J	CZECHII/EiJ	SEA/GnJ
ss355100753	MGP_WTSI_2_103677225	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	C57BL/6J	CZECHII/EiJ	SEA/GnJ
rs261032274					SNP	G	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss355100753	MGP_WTSI_2_103677225	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103667413 () rs orientation: forward

Symbol	Name	Function Class
Gm13875	predicted gene 13875	1886 bp upstream
Gm13877	predicted gene 13877	33 bp downstream
Gm75184	predicted gene, 75184	within coordinates
Rr561946	regulatory region 561946	1611 bp proximal
Tssr19174	transcription start site region 19174	1852 bp upstream