rs260715781 SNP Detail

Summary

• ID
  rs260715781
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108217851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCTCAGCC CACTTTTGGA
  TAACAATGTA GCAACCTTAA GAAAAAAATG AGAAGGGACT TACCTGGAAG GAGAGGAGGT
  TGATGACACC AGGTAAAGGC TGGCGCTACA GGCGCGTGTA CCCATGCGAA TCTCATGGAT
  TCTTACTGAC AGAAAGGCAG TGTGGTTTTT CTGCATCTAT ATGCTATGAA TCGATTTTTT
  W
  AAAAAAATTT TCAAACAAAC TTTTATTTAA TGTTTTGGAG TCTAAATGGG TTATTTTTAT
  GATGGTGCAT GGTCATTTCT GCCTAGGAAG GGAGCTTTTT AGATCACCCT ATTTCAGTCA
  ACCTCGTTAC TACAGTTCAC ACTAGGTGAT GAGGGTGGGA ACATGTGTCA TGACATCGGT
  GTGTCTTCTG CAACTTGAAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320866496	CHEV_3_108113453	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260715781					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108217851 () rs orientation: forward

Symbol	Name	Function Class
Rr583203	regulatory region 583203	337 bp proximal
Rr583204	regulatory region 583204	1256 bp proximal
Sort1	sortilin 1	Intron