rs258096511 SNP Detail

Summary

• ID
  rs258096511
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:113409717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGAACTGA GAGCCTTTTC ATGAAGAAAA
  TACCACCCAG CCACTATTAG CGTGTAAGAC AGCAAAGTAC TGCCCTCCCT CTGTCACTTG
  ACCATGTCAC CTCTCTGTCA CACACACAGC TCTCCAGGCA CGTAATGCCA ACCCTCCAGC
  R
  CTGACATCAG AAAGGAACCt tttttttttt cgagacaggg tttctctgtg tagccctggc
  tgtcctgcaa ctcactctgt agaccaggct ggccttgaac gcagaaatcc gcctgcctct
  gcctcccaag tgctaggatt aaaggcatgt                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321910853	CHEV_6_113382750	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258096511					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113409717 () rs orientation: forward

Symbol	Name	Function Class
Cidec	cell death-inducing DFFA-like effector c	Intron
Rr636515	regulatory region 636515	1544 bp distal
Rr636516	regulatory region 636516	1998 bp proximal
Tssr62446	transcription start site region 62446	765 bp upstream
Tssr62447	transcription start site region 62447	1743 bp downstream
Tssr62448	transcription start site region 62448	1773 bp downstream