rs257614308 SNP Detail

Summary

• ID
  rs257614308
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:14711806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTCCCCA TTAAGAATTT
  ATATGATTTA ATCATTTTCT TCATGAACTT ATACTTGATG TCATAAGATC CTGCTTTTAT
  AAAAGCATTG TTGTTAGTAA AAATTGTAAG TGTATACAGA TCTCTTCTTC ACATTTGTTA
  GATAACCACA CTGAAATATT TCTCTAGGCC TGTGCAAAAT AAATAAAGAA AAATCAATGA
  Y
  GTTTCTTTTT CTGTGAAGCA GAGAGAAAAC CTGCCTTATT AGATGTATTT AACTTAATTT
  CCTTCAGGCT TTCAAATTTG TGAGTCTGTT AGTAGATGTA TATGTAGTGT ACAAAAGAGT
  TTGGAAAAGT AGCCCAAAGC TTCTAAATAT TAAGTTGCTA CCACCCACAT TTGTTACAGG
  ATACTTTTAT AATATTTAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320666900	CHEV_3_14646746	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257614308					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14711806 () rs orientation: forward

Symbol	Name	Function Class
Car13	carbonic anhydrase 13	Intron
Rr374549	regulatory region 374549	963 bp upstream
Rr573698	regulatory region 573698	1985 bp proximal
Tssr28415	transcription start site region 28415	1805 bp downstream