rs256958491 SNP Detail

Summary

• ID
  rs256958491
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:118931859 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCTGACCC TGGGGTGCTC
  AGGTAGCATC TTGCCTGGAA TCAGGAACAG TGCTCAGCTC CTGGCCCAAG CCAGGACACA
  CATACACACA CACACACACA CACACACACA CACACACACA CACAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGAGA GATGCCATGC TGTGCTTCCC GAACAGTGCT CAGCACAGGC
  Y
  CTACAGGGTT TCCCTAGACT CAGCCCCCTC CCTCTTTCTG ACTGCTATGG TGGATGGTGA
  TTGGAGCCAT AAGACAGACG TCTGCTTGAA GGCAAGCCTG GCCACCTTGG GCGGCATTTC
  CCTCTCTGGG CTTTAGTTGT GCTGTCTGTA AAGGAGATAT GAACACATCT TGGTTGCTTC
  AGAGGAAGAC TGGGGTCCCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321285047	CHEV_4_118747267	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs256958491					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118931859 () rs orientation: forward

Symbol	Name	Function Class
Gm35510	predicted gene, 35510	within coordinates
Rr377074	regulatory region 377074	227 bp downstream
Rr598479	regulatory region 598479	1993 bp distal
Rr598480	regulatory region 598480	1925 bp distal
Rr598481	regulatory region 598481	within coordinates
Rr598482	regulatory region 598482	1813 bp proximal
Tssr43077	transcription start site region 43077	1721 bp upstream
Tssr43078	transcription start site region 43078	1695 bp upstream