rs255787086 SNP Detail

Summary

• ID
  rs255787086
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107545637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCAAGCGT TATCAACTGA
  TGGAAGGGCG GCAGGACTCA GCTAATTCCA AGCAGGGATG TGACCGAGCA GGCAGGATCC
  ACTGACCACC AGCTGCACTG GGCAGCCTGA GCCAGAGGGG TGTTTGGCTA ACCCAGCGGG
  TGTTAATGGC TTAGACAGAG CTGGAAGCAC GGCTTTGTCT GGACTTGCCC TGGTCATCGC
  W
  AAGACAGAGT GAAAGTCCCG TTTACAAAGC CAAGCAGTGA GCAAAACAGA CAGACGGGAG
  ACAAGCAGTG AGCAGAACAG ACAGACAGGA GACAAGGCTT TCATGCTGAT GCCCACGACG
  GTTGCTCCTG GGAAAGGCAA GAACGGTCTT AAGAAATAAC AGGAAAAAGC TGGTCCTGAC
  CGTGGCCGTT GATGCTGCCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250045	CHEV_4_107361045	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255787086					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107545637 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	1160 bp upstream
Gm12899	predicted gene 12899	within coordinates
Rr376978	regulatory region 376978	within coordinates
Rr597042	regulatory region 597042	within coordinates
Tssr38260	transcription start site region 38260	49 bp upstream