rs255450199 SNP Detail

Summary

• ID
  rs255450199
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54538690 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACTCCTTC TCAAAAACAA
  GTGAACGACC AATAGAAACA TCTATTCTGT CTCTGCCTTG TAAGACACAG AACACCAAAC
  AAGGCAGCCA GGATAGCCCA CCCAGGCTAT CTATGTCCAT TGTTGACAAG AGATACCCAG
  ATGTGAAAGC CCCCGGGATC TTTGAACGGG TGTCTTTGCT TTCATAAGTC AGAGCTCCAA
  R
  TGGGCTTGGG AAAGCAAATT CTGGAAGCCA GAAGACTCAG TGTAAGCCTA GCCCCTCTAA
  AGACCAGGAG TCCAGAGTCT GAGCTAGAAT CTCCTGCCTG GCAGTCTCTC AAACCCCACT
  CCCATCCTAT CAAATTTAAA CAAACACATG GGCACAAGTC TCTATTTTTA AAAAACAAAA
  CAAAACTTTT ATTTGAGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320772261	CHEV_3_54435191	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs255450199					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54538690 () rs orientation: forward

Symbol	Name	Function Class
B020017C02Rik	RIKEN cDNA B020017C02 gene	1612 bp downstream
Cpgi13170	CpG island 13170	1859 bp proximal
Rr576819	regulatory region 576819	718 bp distal