rs254364861 SNP Detail

Summary

• ID
  rs254364861
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138121353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGATAGAC AGGGGCTGTT
  CCTCTAGGGG TTGGCTGGTG CCGTTTTCAG ACAAAGCATA TGTTGCTGCC TCCTCCCCTG
  ACATTCCGGG GAAAGCTTCC AGCCAGCAAG CCACAAGCTG CAAGCCGGGG ATCATGGGAG
  GTGGCTACCG ACTCTTAAAG GGGGCATTTT CTGGGCCTTT CTCCTGTCCT TGGGCTATGT
  R
  ATGACAATCT CACCCCCAGC AGGGCTGGCA AACACAACAC AGGAGGGGTG ACAGGCCTGA
  AAAAGCAGAT TTACTTTATT TACAATGATC AGTAGATGAC ATAGATCTTT GGGTTTTGAT
  GGCCTTGTGG AGACACCTGG GCAGGGCTCA CCCCGGTCTC CTTGTTAGTA CCTCCTCCTC
  CCTCAGCCTG CATGTGAGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321373118	CHEV_4_137949957	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs254364861					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138121353 () rs orientation: forward

Symbol	Name	Function Class
AB041806	hypothetical protein, MNCb-2457	1156 bp upstream
Cpgi15151	CpG island 15151	497 bp proximal
Fam43b	family with sequence similarity 43, member B	50 bp downstream
Rr602906	regulatory region 602906	771 bp proximal
Rr602907	regulatory region 602907	1344 bp proximal
Rr602908	regulatory region 602908	1371 bp proximal