rs252024904 SNP Detail

Summary

• ID
  rs252024904
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52661652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCTACTAT CTTAGGATAT
  GAACTTTTAT TTCCATGGGA TATTTACTCC AAATGATCAT TTGTTTAACC CACTGAACTA
  CACAGATCAC AAGAAGGTAG TATTCATGGT TAACATCTTG CTGGGAACAA TACTAAGAAA
  ATATGTTTTC TAAGAGTGAG TGTATAAAAC AGGTAGAAAA ATAGAAGCAA ATTACCTTAA
  R
  TAAAAATGGT GAGAGGGGGG TGGAGGCAGC ATCTAGGTTT AGGTGAGAGA CATAATTCTA
  ACTGCACAAG GCAGACCAAT GTTGAATTCC GTGATCACTA TTTTATAAGC AAATGGCAAT
  AAAAAGGAGA AAGGGAGGAG GAGGAAGGAG GAGCACGGTA CAGTGGCATG AGGCACCATT
  CTGCATTGTT AAGGTTCTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765065	CHEV_3_52558153	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252024904					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52661652 () rs orientation: forward

Symbol	Name	Function Class
Gm2447	predicted gene 2447	within coordinates
Rr576580	regulatory region 576580	217 bp proximal
Tssr33262	transcription start site region 33262	814 bp downstream