rs251544382 SNP Detail

Summary

• ID
  rs251544382
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:132442993 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGAG TTCTGGTCCA TTTTTCTCCC
  A
  AGCAGCACAT CCTGTGATGT GTCTT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320509491	CHEV_2_132426809	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251544382					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:132442993 () rs orientation: forward

Symbol	Name	Function Class
AU019990	expressed sequence AU019990	within coordinates
Gm75202	predicted gene, 75202	within coordinates
Rr565500	regulatory region 565500	1530 bp distal
Rr565501	regulatory region 565501	483 bp distal
Rr565502	regulatory region 565502	779 bp proximal
Tssr663	transcription start site region 663	1548 bp downstream
Tssr20313	transcription start site region 20313	1611 bp downstream
Tssr26480	transcription start site region 26480	95 bp downstream