rs251517385 SNP Detail

Summary

• ID
  rs251517385
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:63104725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCACTGTG GAGTTAGAGC TAACTGCCCC
  TTTTCCTGCT CACAATAATA TTCACTGCAA CTGTCTTTGG AAATCATAGG GATCAAAACT
  CTGTTCAGAA TTTGCTCCAG ACTTTGAGTT GGCAGAGTCA GGTCAGGTGG CAGTATCAGC
  Y
  AAAGTCAGAT AAGAAAAATT CCTCTTACCT TTCCCTTGAG AAACCTGTAT TTAGAAAAGC
  AGGAGAAGAT TGGTCAGGTG AAGGGGAAGT GTGTAAGGTG CTTGGGATGT AGCAGCCAGC
  CCTCCCCAAC TCCCCAGGAA CGCATTGTGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323333251	CHEV_10_62731694	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251517385					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:63104725 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm47615	predicted gene, 47615			1144 bp upstream
Herc4	hect domain and RLD 4			Intron
				Noncoding-Transcript-Variant
Rr432772	regulatory region 432772			1509 bp proximal