rs251508142 SNP Detail

Summary

• ID
  rs251508142
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121438920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTTCAGTGT AAGCTCCTCG TTTGTAGAAT TCTGAAGGTG
  GCTCCACAGA GGCCCTTCCT GATGACCTCT TGACTTTGTT CTGCCACCTC CCTCTCCCTC
  Y
  CCCTCTCCCT CTCCTCTCCC TCCCCCTCCC CTCCCCCTCC CCCTTCCTCT CCCTCCCCCT
  CTCTCAGCCT TGGCTATCTT CTCTTCTTCC CCAAGAAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320904498	CHEV_3_121348189	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251508142					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121438920 () rs orientation: forward

Symbol	Name	Function Class
A730020M07Rik	RIKEN cDNA A730020M07 gene	within coordinates
Rr584136	regulatory region 584136	1877 bp distal
Rr584137	regulatory region 584137	1458 bp distal
Rr584138	regulatory region 584138	54 bp proximal